Jane Yu (BME)

Eric Young

BME

Primary Advisor

Raimond Winslow

BME

None

Howard Weinert

ECE

Digital Signal Processing

James Fill

MathSci

Intro. Probability

John Rinzel

NIH

Nonlinear Biodynamics

 

Lee Johnson (BME)

Nitish Thakor

BME

Not Specified

Andreas Andreou

BME

Not Specified

Norman Sheppard

BME

Not Specified

Daniel Hanley

Neurology

Not Specified

Michael Thomas

APL

Not Specified

 

Rong Xue (BME)

John Forder

Radiology

Primary Advisor

Elliot McVeigh

BME

Magnetic Resonance in Medicine

Topics of Medical Imaging Systems

John Goutsias

ECE

Image Processing

William Hunter

BME

Not Specified

Jerry Prince

ECE

Topics of Medical Imaging Systems

 

Joseph Greenstein (BME)

Raimond Winslow

BME

Primary Advisor

HPC in Biology

David Yue

BME

Ionic Channels

James Fill

MathSci

Intro. Probability

John Weirman

MathSci

Stochastic Processes

Thordur Runolfsson

ECE

Linear Systems Theory

 

Guy Shechter (BME)

Elliot McVeigh

BME

Primary Advisor

MRI in Medicine

David Kass

Cardiology

Cardiovascular Physiology

Jonathan Schneck

Immunology

Immunology

Ergin Atalar

Radiology

DSP

Gerald Masson

CS

Computer Networking

 

Tonya Matthews (BME)

Eric Young

BME

Models of the Neuron

John Weirman

MathSci

Stochastic Processes

King-Wei Yau

Neuroscience

Neuro A

Stewart Hendry

Neuroscience

Neuro A

Drew Pardoll

Immunology

Immunology

Mark Humayun

Wilmer Eye Inst.

Primary Advisor

 

Tsai Yien Che (BME)

Nitish Thakor

BME

Biomedical Instrumentation

Neuroengineering

David Yue

BME

Ionic Channels

Paul Manis

Otolaryngology

Exp. Foundations of Neural Modeling

John Wierman

MathSci

Stochastic Processes

Intro. Probability

Daniel Naiman

MathSci

Statistical Theory

Intro. Statistics

Time Series Analysis

 

Dennis Barbour (BME)

John Wierman

MathSci

Stochastic Processes

Jay Baraban

Neuroscience

Neuro A

Xiaoqin Wang

BME

Movement and Vocalization

Charlie Wiener

Medicine

Pathophysiology

Eric Young

BME

Models of the Neuron

 

Christopher Yeung (BME)

Elliot McVeigh

BME

MRI in Medicine

Jerry Prince

ECE

Medical Imaging

Random Signals

Ergin Atalar

Radiology

Not Specified

David Kass

Cardiology

Physiology

Hasan Oguz

MechE

Applied Math for Engineering

 

Trevor Huang (BME)

Rita Alevriadou

BME

Biological Transport

Aleksander Popel

BME

Biological Transport

Kaliat Ramesh

MechE

Continuum Mechanics

Hasan Oguz

MechE

Applied Math for Engineering

Richard Royall

Biostatistics

Biostatistics

 

Krishnendu Roy (BME)

Kam Leong

BME

Primary Advisor

Cell and Tissue Engineering

Rita Alevriadou

BME

Cell and Tissue Engineering

Hasan Oguz

MechE

Applied Math for Engineering

Chip Montrose

Medicine

Physiology

Shau-Ku Huang

Medicine

Immunology

 

Tom Lu (BME)

John Wierman

MathSci

Stochastic Processes

Xiaoqin Wang

BME

Not Specified

David Ryugo

Otolaryngology

Struct. and Function of the Auditory Sys.

Raimond Winslow

BME

High Performance Computing

Cheng Cheng

MathSci

Linear Statistical Models

 

Vaibhava Goel (BME)

Eric Young

BME

Models of the Neuron

Nitish Thakor

BME

Biomedical Instrumentation

Fred Jelinek

ECE

Information Extraction from Speech

Lancelot James

MathSci

Statistical Theory

Luigi Burzio

CogSci

Sound Structure of Natural Languages

 

Mike Erickson (BME)

David Yue

BME

Advisor

Eric Young

BME

Models of the Neuron

Lenny Brand

Biology

Fluorescence Spectroscopy

John Wierman

MathSci

Stochastic Processes

Howard Weinert

ECE

Filtering and Smoothing

 

Arup Roy (BME)

Ernst Niebur

Neuroscience

Primary Advisor

Eric Young

BME

Models of the Neuron

Steven Hsiao

Neuroscience

Neuro A

Jay Baraban

Neuroscience

Neuro A

John Wierman

MathSci

Stochastic Processes

 

Jonathan Sorger (BME)

Elliot McVeigh

BME

MRI in Medicine

Ergin Atalar

Radiology

DSP

William Hunter

BME

Cardiovascular Physiology

Kaliat Ramesh

MechE

Continuum Mechanics

Solid Mechanics

S. Sadegh-Nasseri

Immunology

Immunology

 

Daniel Ennis (BME)

Andrew Douglas

ME

Finite Elasticity

William Hunter

BME

Cardiovascular Physiology

Scot Kuo

BME

Cell Mechanics

Peter Gillespie

Physiology

Cell Physiology

Kaliat Ramesh

MechE

Solid Mechanics

 

Owen Faris (BME)

Elliot McVeigh

BME

Primary Advisor

MRI in Medicine

David Kass

Cardiology

Cardiovascular Physiology

John Goutsias

ECE

Image Processing

Kaliat Ramesh

MechE

Continuum Mechanics

Aleksander Popel

BME

Fluids

  

Jonathan Sachs (BME)

Tom Woolf

Physiology

Not Specified

bullet Membrane biophysics

David Yue

BME

Not Specified

bullet

Ion channel gating

bullet

Hodgkin-Huxley models

Colin McCulloch

Biostatistics

Not Specified
bullet

Probability

bullet

Image processing

B. Garcia-Moreno

Biophysics

Not Specified
bullet

Molecular biophysics

bullet

Binding

Doug Barrick

Biophysics

Not Specified
bullet

Biochemistry

bullet

Protein structure

bullet

Kinetics

 

Lina Reiss (BME)

Bradford May

Otolaryngology

Struct. and Function of the Auditory Sys.

Carey Priebe

MathSci

Probability

Trac Tran

ECE

Wavelets

Time Frequency Analysis

John Wierman

MathSci

Stochastic Processes

Eric Young

BME

Models of the Neuron

Theoretical Neuroscience

 

Robert Susil (BME)

Ergin Atalar

Radiology

MRI in Medicine

John Wierman

MathSci

Stochastic Processes

Trac Tran

ECE

Wavelets

Filter Banks

William Hunter

BME

Cardiovascular Physiology

Jin Kang

ECE

Optics/Waveguides/Lasers

 

Tony Faranesh (BME)

Elliot McVeigh

BME

MRI in Medicine

William Hunter

BME

Cardiovascular Physiology

Leslie Hall

MathSci

Optimization

John Goutsias

ECE

DSP

Hasan Oguz

APL

Applied Math

  

Darren Gray (BME)

Douglas Murphy

Cell Biology

Not Specified

bullet

Draw a typical epithelial layer.

bullet

How do molecules get across epithelial layers?

bullet

How could you determine the rates of passage through/between epithelial cells?

bullet

What equation(s) are relevant to molecules diffusing between cells?

bullet

How could you image this?

bullet

What are relative advantages and disadvantages of optical vs. electron microscopy for imaging this situation?

Howard Fairbrother

MaterialsSci

Not Specified

bullet

What's the difference between metal, semiconductor, and polymer surfaces?

bullet

What is surface relaxation. Why does it happen? What are relative amounts of relaxatin on polymer, semiconductor, and metal. Why?

bullet

Why are some oxide layers stable?  Do oxides surface relax more or less than plain metal?

bullet

Where is the weak point in a metal covered with a metal oxide?  Why?  How does this cracking between oxide and plain aluminum cause an airplane to fail?

bullet

What are the different types of depth profiling?  What do they help you see?

bullet

Why is imaging XPS resolution poor?

bullet

Why is Augier surface sensititve?

Christopher Chen

BME

Not Specified
bullet

Draw an amino acid.

bullet

Draw a protein molecule and explain how the amino acids form this.

bullet

How long is a typical Carbon-carbon bond?

bullet

Using 4 angstroms as a typical C-C bond, estimate the volume of a 30kD
protein.

bullet

How does a cell get out of a blood vessel?

bullet

Why is elastin elastic? Why is it different in tension vs compression?

bullet

What are the basic components of a typical heart valve. (this built off my previous valve design research)

bullet

Why is the valve made out of these things?

bullet

Why does a mechanical valve fail before a physiological valve?

bullet

Why does "fixed" porcine valve fail before living valve?

bullet

Would cells invade a "fixed" valve? If so, how?

bullet

What happens during fixation?

Andrew Douglas

MechE

Not Specified
bullet

Develop model for populations of gazelles and cheetahs if there is unlimited food for the gazelles. Is this model linear? ODE or PDE?

bullet

What's the difference between on ODE and a PDE?

bullet

Graph out the course that the 2 populations (cheetah and gazelles) would take. Find equilibrium point using dimensional analysis.

bullet

How could you solve this type of equation numerically?

bullet

What is the significance of time steps in numerical solutions? How does the equation determine appropriate time steps?

bullet

What is the diffusion equation?

bullet

How do you get from the diffusion equation to a characteristic diffusion length?

Mark Soloski

Immunology

Not Specified
bullet How does T cell antigen recognition take place? Explain and draw relevant molecules. How is the antigen processed?
bullet How does T cell internal receptor signaling work?
bullet What is the composition of the T cell receptor?
bullet What is the basic structure of an MHC gene product molecule?
bullet Which parts of the T cell receptor and the MHC molecule are variable?
bullet Where does antigen bind the MHC molecule? Describe the structure of this binding cleft?
bullet How could you detect the protein contents of a single cell? (This built off my research project.)

 

Ronald Jean (BME)

Marc Parlange

GEE/ME

Applied Math for Engineers

Kaliat Ramesh

MechE

Continuum Mechanics

Solid Mechanics

Alexander Spector

BME

Cell Mechanics

Paul Fuchs

BME

Struct. and Function of the Auditory Sys.

Greg Chirikjian

ME

Computational Methods of Engin. Math

  

Faisal Karmali (BME)

Mark Shelhamer

Otolaryngology

Vestibular and Oculomotor Systems

bullet

Draw trajectory of the NASA KC-135 "Vomit Comet", its velocity and accelerations. Shadmehr: What force field do the occupants feel? Shadmehr: What forces does a passenger on a Merry-go-round feel?

bullet

Forces on a satellite orbiting earth.

bullet

Hypothesize a mechanism for space motion sickness.

Ernst Niebur

Neuroscience

Computational Neuroscience

bullet

Cable theory: assumptions; round vs. spherical neuron; derivations.

bullet

Phase plane analysis of neuron: dV/dt=f(v)-W, dW/dt=-V

Reza Shadmehr

BME